Gene: nfi-1 - Caenorhabditis elegans
Last modified: Dec 09, 2014. Release 1 • Page created: May 19, 2024
Summary
Gene Symbol | : | nfi-1 | ||||||||||||||||||||
NCBI Gene ID | : | 174225 | ||||||||||||||||||||
Species | : | Caenorhabditis elegans | ||||||||||||||||||||
Gene Synonyms | : | CELE_ZK1290.4 | nfi-1 | Protein NFI-1 Source: GPSDB |
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Gene Homologs | : | |||||||||||||||||||||
Ageing Relevance Analysis | : |
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Ageing Factor Stable ID | : | AF_007311 | ||||||||||||||||||||
Download | : | XML |
Protein Information
Protein Name | Species | UniProt Accession Number | UniProt Entry Name | Protein Function | Sequence |
---|---|---|---|---|---|
Protein NFI-1, isoform a | Caenorhabditis elegans | Q09631 (UniProtKB/TrEMBL) | Q09631_CAEEL (UniProtKB/TrEMBL) | View | |
Protein NFI-1, isoform b | Caenorhabditis elegans | Q5H9N2 (UniProtKB/TrEMBL) | Q5H9N2_CAEEL (UniProtKB/TrEMBL) | View | |
Protein NFI-1, isoform c | Caenorhabditis elegans | Q5H9N3 (UniProtKB/TrEMBL) | Q5H9N3_CAEEL (UniProtKB/TrEMBL) | View |
Observations
Ageing Phenotype
Data Type 1
Ageing Relevance:
- yes (Exp. Analysis)
- yes, but no ageing factor assigned (Exp. Analysis)
- no (Exp. Analysis)
- putative (Comp. Analysis)
# | Observation Stable ID | Species | Gene | Other Ageing Factor | Description | PubMed | Source | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
1 | OB_005616 | Caenorhabditis elegans |
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Deletion results in animals with defects in movement, pharyngeal pumping and egg-laying, and with a reduced lifespan. | 16242019 | GenAge |
Data Type 2
Ageing Relevance:
- yes (Exp. Analysis)
- yes, but no ageing factor assigned (Exp. Analysis)
- no (Exp. Analysis)
- putative (Comp. Analysis)
Organism | Ageing Factor | Lifespan Observation | Reference | ||||||||||||||||||||||||||||||||
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# | Observation Stable ID | Species | Strain | Gene | Compound | Other Ageing Factor | Significant Lifespan Effect | Change | Observed Lifespan | Reference Lifespan | Lifespan Unit | Measure | Temperature | Temperature Unit | Sex/Mating Type | Description | Author | Year | PubMed | DOI | Source | ||||||||||||||
1 | OB_002516 | Caenorhabditis elegans | N2 |
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decreased | -28.57% | 10 | 14 | days | median | 20 | ℃ | hermaphrodite | Deletion results in a 29% reduced lifespan. Other phenotypes: Deletion results in animals with defects in movement, pharyngeal pumping and egg-laying. | Lazakovitch et al. | 2005 | 16242019 | doi:10.1186/1471-213X-5-24 | Lifespan Observations Database (ID: 3771) | ||||||||||||||||
2 | OB_005617 | Caenorhabditis elegans |
|
decreased | unknown | Deletion results in animals with defects in movement, pharyngeal pumping and egg-laying, and with a reduced lifespan. | Lazakovitch et al. | 2005 | 16242019 | doi:10.1186/1471-213X-5-24 | GenAge |
Homology Analysis
no homology analysis observation available
Sequences
Q09631_CAEEL | Q09631 | Protein NFI-1, isoform a (Caenorhabditis elegans) from UniProtKB/TrEMBL Length: 807 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 Q09631_CAEEL 1 MEPHLKIDVSSASGSTTTGATASTSEAPQDSQAQQTMPPPSSDWSNQFNSPEAEDMGPFVEQLLPFVRASAYNWFHLQAAKRRHFKEFDKKMCASEENAKLAELQNDRDELKVKWASRLLGKIKKDIQNDDKEAFISAINGSEPNKCIISVADQKGKMRRIDCLRQADKVWRLDLVTIILFKGIPLESTDGERLERSEACVHPLCINPFHMAISVRGLDVFMANYLKDVDTKITLTYPRNDELSDTVMVKQEPGEQTIVAPHAVLGTSSTHTRVWETNSERNAETIIITYDPQKACHTYFGGRATLAQQSLSAGNTYMVNKTAVDNNFFNAKRSVLCLPPPPIQNCFPYPIAGTSDSQQMDMSEDSNDGPSEKRSRDISSHDSPNSSTNDEVRRIVESGTEKLVLGSSIWAAPGQFSRTQQNQGAPGTSRQVRPLPDFQSQDSARSPGAFRSTAKPVCRMTVNTGNHGDVGVVVVDERNREHVIHAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFEFLNCNQEMNKNEGALGSDISPTHTAVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEKHLQHNQPSTSYCNSQIQPPILSSKPVDSSVKLIAPVAVKPIMSGCNSIIPSPITTPRITPSFRMLEDDSLINVLGQLAHSNDGTTLNDSFIQHLIDTNSRSPLLSSGNAFSALSMGAVSGLVPGNSIHRPDSSASNGSNSLGVAMGLAVPQNIALAVQQTQNAMSPLHQIRVSVGAPPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPTDFSHALRNEKK 807
Q5H9N2_CAEEL | Q5H9N2 | Protein NFI-1, isoform b (Caenorhabditis elegans) from UniProtKB/TrEMBL Length: 787 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 Q5H9N2_CAEEL 1 MPPPSSDWSNQFNSPEAVSPKANGIKCFSPYSQEDMGPFVEQLLPFVRASAYNWFHLQAAKRRHFKEFDKKMCASEENAKLAELQNDRDELKVKWASRLLGKIKKDIQNDDKEAFISAINGSEPNKCIISVADQKGKMRRIDCLRQADKVWRLDLVTIILFKGIPLESTDGERLERSEACVHPLCINPFHMAISVRGLDVFMANYLKDVDTKITLTYPRNDELSDTVMVKQEPGEQTIVAPHAVLGTSSTHTRVWETNSERNAETIIITYDPQKACHTYFGGRATLAQQSLSAGNTYMVNKTAVDNNFFNAKRSVLCLPPPPIQNCFPYPIAGTSDSQQMDMSEDSNDGPSEKRSRDISSHDSPNSSTNDEVRRIVESGTEKLVLGSSIWAAPGQFSRTQQNQGAPGTSRQVRPLPDFQSQDSARSPGAFRSTAKPVCRMTVNTGNHGDVGVVVVDERNREHVIHAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFEFLNCNQEMNKNEGALGSDISPTHTAVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEKHLQHNQPSTSYCNSQIQPPILSSKPVDSSVKLIAPVAVKPIMSGCNSIIPSPITTPRITPSFRMLEDDSLINVLGQLAHSNDGTTLNDSFIQHLIDTNSRSPLLSSGNAFSALSMGAVSGLVPGNSIHRPDSSASNGSNSLGVAMGLAVPQNIALAVQQTQNAMSPLHQIRVSVGAPPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPTDFSHALRNEKK 787
Q5H9N3_CAEEL | Q5H9N3 | Protein NFI-1, isoform c (Caenorhabditis elegans) from UniProtKB/TrEMBL Length: 823 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 Q5H9N3_CAEEL 1 MEPHLKIDVSSASGSTTTGATASTSEAPQDSQAQQTMPPPSSDWSNQFNSPEAVSPKANGIKCFSPYSQEDMGPFVEQLLPFVRASAYNWFHLQAAKRRHFKEFDKKMCASEENAKLAELQNDRDELKVKWASRLLGKIKKDIQNDDKEAFISAINGSEPNKCIISVADQKGKMRRIDCLRQADKVWRLDLVTIILFKGIPLESTDGERLERSEACVHPLCINPFHMAISVRGLDVFMANYLKDVDTKITLTYPRNDELSDTVMVKQEPGEQTIVAPHAVLGTSSTHTRVWETNSERNAETIIITYDPQKACHTYFGGRATLAQQSLSAGNTYMVNKTAVDNNFFNAKRSVLCLPPPPIQNCFPYPIAGTSDSQQMDMSEDSNDGPSEKRSRDISSHDSPNSSTNDEVRRIVESGTEKLVLGSSIWAAPGQFSRTQQNQGAPGTSRQVRPLPDFQSQDSARSPGAFRSTAKPVCRMTVNTGNHGDVGVVVVDERNREHVIHAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFEFLNCNQEMNKNEGALGSDISPTHTAVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEKHLQHNQPSTSYCNSQIQPPILSSKPVDSSVKLIAPVAVKPIMSGCNSIIPSPITTPRITPSFRMLEDDSLINVLGQLAHSNDGTTLNDSFIQHLIDTNSRSPLLSSGNAFSALSMGAVSGLVPGNSIHRPDSSASNGSNSLGVAMGLAVPQNIALAVQQTQNAMSPLHQIRVSVGAPPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPTDFSHALRNEKK 823
References
MeSH Terms: Only a subset of the Medical Subject Headings terms is shown: the Major Topics MeSH terms. They describe one of the main topics discussed in the article denoted by an asterisk on the MeSH term or MeSH/Subheading combination on the PubMed page. MeSH terms that belong to the Ageing MeSH are highlighted in green.
- Lazakovitch E, Kalb JM, Matsumoto R, Hirono K, Kohara Y, Gronostajski RM:
nfi-I affects behavior and life-span in C. elegans but is not essential for DNA replication or survival.
BMC Dev Biol. 2005; 5: 24.
PubMed (ID: 16242019), PubMed Central (ID: PMC1277823), doi:10.1186/1471-213X-5-24
MeSH Terms: Behavior, Animal; Caenorhabditis elegans/physiology; DNA Replication; Longevity; NFI Transcription Factors/physiology
Sources
Ageing-related Data Sources
Additional Data Sources
- AgeFactDB Pipeline
- GPSDB
- NCBI Taxonomy
- PubMed
- UniProtKB/TrEMBL