Gene: exosc5 - Danio rerio
Last modified: Dec 09, 2014. Release 1 • Page created: May 19, 2024
Summary
Gene Symbol | : | exosc5 | ||||||||||||
NCBI Gene ID | : | 751632 | ||||||||||||
Species | : | Danio rerio | ||||||||||||
Gene Synonyms | : | CH211-194N6.2 | exosc5 | exosome complex exonuclease RRP46 | exosome component 5 | si:ch211-194n6.2 | zgc:153707 Source: GPSDB |
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Gene Homologs | : | AgaP_AGAP002177 (Anopheles gambiae) | AGOS_AAR035C (Eremothecium gossypii) | AT3G46210.1 (Arabidopsis thaliana) | crn-5 (Caenorhabditis elegans) | EXOSC5 (Bos taurus) | EXOSC5 (Canis lupus familiaris) | exosc5 (Danio rerio) | EXOSC5 (Homo sapiens) | EXOSC5 (Macaca mulatta) | Exosc5 (Mus musculus) | EXOSC5 (Pan troglodytes) | Exosc5 (Rattus norvegicus) | KLLA0D14993g (Kluyveromyces lactis) | LOC100858931 (Gallus gallus) | MGG_09936 (Magnaporthe oryzae) | NCU03268 (Neurospora crassa) | Os03g0854200 (Oryza sativa) | Rrp46 (Drosophila melanogaster) | RRP46 (Saccharomyces cerevisiae) | ||||||||||||
Ageing Relevance Analysis | : |
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Ageing Factor Stable ID | : | AF_007906 | ||||||||||||
Download | : | XML |
Protein Information
Protein Name | Species | UniProt Accession Number | UniProt Entry Name | Protein Function | Sequence |
---|---|---|---|---|---|
Exosome component 5 | Danio rerio | Q0P3Y3 (UniProtKB/TrEMBL) | Q0P3Y3_DANRE (UniProtKB/TrEMBL) | View | |
Novel protein similar to mouse and human exosome component 5 (EXOSC5) | Danio rerio | Q1LVM4 (UniProtKB/TrEMBL) | Q1LVM4_DANRE (UniProtKB/TrEMBL) | View |
Observations
Ageing Phenotype
Data Type 1
no ageing phenotype observation—data type 1 available
Data Type 2
no ageing phenotype observation—data type 2 available
Homology Analysis
Ageing Relevance:
- yes (Exp. Analysis)
- yes, but no ageing factor assigned (Exp. Analysis)
- no (Exp. Analysis)
- putative (Comp. Analysis)
Legend:
- #EGHG:
- Number of Experimentally Confirmed Ageing-related Genes In Homology Group
# | Observation Stable ID | Homology Group Genes | #EGHG | Description | Source | Homology Source |
---|---|---|---|---|---|---|
1 | OB_008170 | 1 | The HomoloGene homology group 5981 contains 1 gene with experimental evidence for ageing relevance (crn-5 - Caenorhabditis elegans) and 18 other genes. | AgeFactDB Homology Analysis | HomoloGene homology group 5981 |
Sequences
Q0P3Y3_DANRE | Q0P3Y3 | Exosome component 5 (Danio rerio) from UniProtKB/TrEMBL Length: 218 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 Q0P3Y3_DANRE 1 MELERSCPVLREYGSEQSLLSRPDGSSTFVQGDTSILAGVYGPAEVKVSKEIYDRATVEVLIQPKMGLPSVRERAREQCVRETCEAALLLTLHPRSSLTVILQVVHDDGSLLSCCLNAACMALMDAGLPMSRLFCSVTCAISKEGQIITDPTARQEKVSRALLTFAIDSNERNVLMSSTTGSFSVQELQQCIAISQKASEQIFQFYRDSVKRRYSKMQ 218
Q1LVM4_DANRE | Q1LVM4 | Novel protein similar to mouse and human exosome component 5 (EXOSC5) (Danio rerio) from UniProtKB/TrEMBL Length: 128 10 20 30 40 50 60 70 80 90 100 110 120 Q1LVM4_DANRE 1 MRTEMELERSCPVLREYGSEQSLLSRPDGSSTFVQGDTSILAGVYGPAEVKVSKEIYDRATVEVLIQPKMGLPSVRERAREQCVRETCEAALLLTLHPRSSLTVILQVVHDDGSVSSTPAKLFFINAK 128
References
no reference information available
Sources
Ageing-related Data Sources
- AgeFactDB Homology Analysis
Additional Data Sources
- AgeFactDB Pipeline
- GPSDB
- HomoloGene
- UniProtKB/TrEMBL