Gene: VTC4 - Arabidopsis thaliana
Last modified: Dec 09, 2014. Release 1 • Page created: May 19, 2024
Summary
Gene Symbol | : | VTC4 | ||||||||||||
NCBI Gene ID | : | 821206 | ||||||||||||
Species | : | Arabidopsis thaliana | ||||||||||||
Gene Synonyms | : | |||||||||||||
Gene Homologs | : | AgaP_AGAP006570 (Anopheles gambiae) | CG9391 (Drosophila melanogaster) | IMPA1 (Bos taurus) | IMPA1 (Canis lupus familiaris) | impa1 (Danio rerio) | IMPA1 (Gallus gallus) | IMPA1 (Homo sapiens) | IMPA1 (Macaca mulatta) | Impa1 (Mus musculus) | Impa1 (Rattus norvegicus) | INM1 (Saccharomyces cerevisiae) | INM2 (Saccharomyces cerevisiae) | LOC100613673 (Pan troglodytes) | MGG_06165 (Magnaporthe oryzae) | NCU06348 (Neurospora crassa) | Os03g0587000 (Oryza sativa) | ttx-7 (Caenorhabditis elegans) | VTC4 (Arabidopsis thaliana) | ||||||||||||
Ageing Relevance Analysis | : |
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Ageing Factor Stable ID | : | AF_010213 | ||||||||||||
Download | : | XML |
Protein Information
Protein Name | Species | UniProt Accession Number | UniProt Entry Name | Protein Function | Sequence |
---|---|---|---|---|---|
Inositol-phosphate phosphatase | Arabidopsis thaliana | B3H749 (UniProtKB/TrEMBL) | B3H749_ARATH (UniProtKB/TrEMBL) | View | |
Inositol-phosphate phosphatase | Arabidopsis thaliana | F4IYH1 (UniProtKB/TrEMBL) | F4IYH1_ARATH (UniProtKB/TrEMBL) | View | |
Inositol-phosphate phosphatase | Arabidopsis thaliana | Q9M8S8 (UniProtKB/Swiss-Prot) | VTC4_ARATH (UniProtKB/Swiss-Prot) | Phosphatase acting on L-galactose 1-phosphate (L-Gal 1-P), D-myoinositol 3-phosphate (D-Ins 3-P) and D-myoinositol 1-phosphate (D-Ins 1-P). Can also use beta-glycerophosphate (glycerol 2-P) and, to a leser extend, D-galactose 1-phosphate (D-Gal 1-P), alpha-D-glucose 1-phosphate (a-D-Glc 1-P), D-manitol 1-phosphate and adenosine 2'-monophosphate as substrates. No activity with D-fructose 1-phosphate (D-Fru 1-P), fructose 1,6-bisphosphate (Fru 1,6-bisP), D-glucose 6-phosphate (D-Glc 6-P), D-alpha-glycerophosphate (glycerol 3-P), D-sorbitol 6-phosphate and D-myoinositol 2-phosphate. The C1 phosphate position in a six-member ring substrate is important for catalysis. | View |
Observations
Ageing Phenotype
Data Type 1
no ageing phenotype observation—data type 1 available
Data Type 2
no ageing phenotype observation—data type 2 available
Homology Analysis
Ageing Relevance:
- yes (Exp. Analysis)
- yes, but no ageing factor assigned (Exp. Analysis)
- no (Exp. Analysis)
- putative (Comp. Analysis)
Legend:
- #EGHG:
- Number of Experimentally Confirmed Ageing-related Genes In Homology Group
# | Observation Stable ID | Homology Group Genes | #EGHG | Description | Source | Homology Source |
---|---|---|---|---|---|---|
1 | OB_008258 | 2 | The HomoloGene homology group 4043 contains 2 genes with experimental evidence for ageing relevance (INM1 - Saccharomyces cerevisiae | INM2 - Saccharomyces cerevisiae) and 16 other genes. | AgeFactDB Homology Analysis | HomoloGene homology group 4043 |
Sequences
B3H749_ARATH | B3H749 | Inositol-phosphate phosphatase (Arabidopsis thaliana) from UniProtKB/TrEMBL Length: 268 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 B3H749_ARATH 1 MADNDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFDPSGKDLDITSQRIAASNASLKELFAEALRLTGA 268
F4IYH1_ARATH | F4IYH1 | Inositol-phosphate phosphatase (Arabidopsis thaliana) from UniProtKB/TrEMBL Length: 269 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 F4IYH1_ARATH 1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFDPSGKDLDITSQRIAASNASLKELFAEALRLTGA 269
VTC4_ARATH | Q9M8S8 | Inositol-phosphate phosphatase (Arabidopsis thaliana) from UniProtKB/Swiss-Prot Length: 271 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 VTC4_ARATH 1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFDPSGKDLDITSQRIAASNASLKELFAEALRLTGA 271
References
no reference information available
Sources
Ageing-related Data Sources
- AgeFactDB Homology Analysis
Additional Data Sources
- AgeFactDB Pipeline
- HomoloGene
- UniProtKB/Swiss-Prot
- UniProtKB/TrEMBL